Bioinformatics

rm(list = ls()) options()$repos options()$BioC_mirror #options(BioC_mirror="https://mirrors.ustc.edu.cn/bioc/") options(BioC_mirror="http://mirrors.tuna.tsinghua.edu.cn/bioconductor/") options("repos" = c(CRAN="https://mirrors.tuna.tsinghua.edu.cn/CRAN/")) options()$repos options()$BioC_mirror # https://bioconductor.org/packages/release/bioc/html/GEOquery.html if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install(c("GSEABase","GSVA","clusterProfiler" ),ask = F,update = F) BiocManager::install(c("GEOquery","limma","impute" ),ask = F,update = F) BiocManager::install(c("org.Hs.eg.db","hgu133plus2.db" ),ask = F,update = F) # 下面代码被我注释了，意思是这些代码不需要运行，因为它过时了，很...